Fields of Research
- Drug Discovery and Precision Medicine
- Gene Architecture and Action
- Molecular Basis of Disease
Research Summary
The Shechner lab strives to understand how RNAs regulate mammalian cellular architecture, and to develop novel technologies for probing noncoding RNA functions throughout health and disease.
Research Statement
Beyond coding for proteins, RNA molecules drive an extraordinary array of cellular processes throughout all kingdoms of life. In humans, emerging evidence suggest that many RNAs may play essential and dynamic architectural roles within the cell. This includes RNAs that help to organize higher-order chromatin domains, or which scaffold membraneless organelles that control gene-expression, metabolic, and stress-response programs. Dysregulation of these RNA-mediated structures has been causally implicated in a broad range of human pathologies, including neurodegenerative diseases like ALS, retroviral infections like HIV/AIDS, and nearly all cancers. This implies that RNA-mediated interactions may represent a vast, untapped resource of potential therapeutic targets. Yet, most of these potentially targetable interactions remain uncharacterized, due to the limitations of existing technologies. The Shechner Lab strives to overcome this technological gap, by developing novel methods for interrogating RNAs’ influence on cellular architecture, and for probing the molecular interactions that underlie these architectural functions in both health and disease.
Awards and Honors
CCSG/Safeway Early Career Award in Cancer Research 2019–2020
HHMI/Jane Coffin Childs Memorial Fund Postdoctoral Fellowship 2011–2014
David Shechner
Assistant Professor of Pharmacology
Affiliations
Graduate Programs:
Pharmacology,
Molecular & Cellular Biology (MCB)
Biological Physics, Structure and Design (BPSD)
Molecular Engineering Sciences (MolES)
Other Affiliations:
UW Center of Nuclear Organization and Function (UW-CNOF)
BBI
Institute for Stem Cell and Regenerative Medicine (ISCRM)
Fred Hutch/UW Cancer Consortium
RNA Society
David Shechner
Assistant Professor of Pharmacology
Affiliations
Graduate Programs:
Pharmacology,
Molecular & Cellular Biology (MCB)
Biological Physics, Structure and Design (BPSD)
Molecular Engineering Sciences (MolES)
Other Affiliations:
UW Center of Nuclear Organization and Function (UW-CNOF)
BBI
Institute for Stem Cell and Regenerative Medicine (ISCRM)
Fred Hutch/UW Cancer Consortium
RNA Society
Faculty
- Building:
- Health Sciences Building, K-Wing
- Room:
- K-540A
- Box:
- Box 357280
- Phone:
- (206) 543-0776
Lab
- Building:
- Health Sciences Building, K-Wing
- Room:
- K-554
- Web Link:
- http://shechnerlab.org/
David Shechner
Assistant Professor of Pharmacology
Affiliations
Graduate Programs:
Pharmacology,
Molecular & Cellular Biology (MCB)
Biological Physics, Structure and Design (BPSD)
Molecular Engineering Sciences (MolES)
Other Affiliations:
UW Center of Nuclear Organization and Function (UW-CNOF)
BBI
Institute for Stem Cell and Regenerative Medicine (ISCRM)
Fred Hutch/UW Cancer Consortium
RNA Society
PHCOL 514 A (Guest lecturer)
MCB 514 (Guest lecturer)
BIOC 540 A (Guest lecturer)
BPSD 541 (Guest lecturer)
David Shechner
Assistant Professor of Pharmacology
Affiliations
Graduate Programs:
Pharmacology,
Molecular & Cellular Biology (MCB)
Biological Physics, Structure and Design (BPSD)
Molecular Engineering Sciences (MolES)
Other Affiliations:
UW Center of Nuclear Organization and Function (UW-CNOF)
BBI
Institute for Stem Cell and Regenerative Medicine (ISCRM)
Fred Hutch/UW Cancer Consortium
RNA Society
Ashley Student (Pharmacology Graduate Student)
Jessica Gianopulos (MCB Graduate Student, joint with Sita Kugel)
Chris Hsu (Technician)
David Shechner
Assistant Professor of Pharmacology
Affiliations
Graduate Programs:
Pharmacology,
Molecular & Cellular Biology (MCB)
Biological Physics, Structure and Design (BPSD)
Molecular Engineering Sciences (MolES)
Other Affiliations:
UW Center of Nuclear Organization and Function (UW-CNOF)
BBI
Institute for Stem Cell and Regenerative Medicine (ISCRM)
Fred Hutch/UW Cancer Consortium
RNA Society
Select Publications
(* co-first authors)
1) P. Maass, R. Barutucu, D.M. Shechner, C.L. Weiner, M. Melé, and J.L. Rinn. Spatiotemporal allele organization by allele-specific CRISPR live-cell imaging (SNP-CLING). Nature Structural and Molecular Biology, 2018, 25(2): 176–84
2) P. Kaewsapsak*, D.M. Shechner*, W. Mallard, J.L. Rinn, and A. Y. Ting. APEX-RIP: Live cell mapping of organelle-associated RNAs by proximity biotinylation and protein-RNA crosslinking. eLife, 2017, 6:e29224
3) D.M. Shechner, E. Hacisuleyman, S.T. Younger, and J.L.Rinn. Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display. Nature Methods, 2015, 12(7): 664–70.
4) D.M. Shechner and D.P. Bartel. The structural basis of RNA-catalyzed RNA polymerization. Nature Structural and Molecular Biology, 2011, 18(9): 1036–42
5) D.M. Shechner, R.A. Grant, S.C. Bagby, Y. Koldobskaya, J.A. Piccirilli, and D.P. Bartel. Crystal structure of the catalytic core of an RNA-polymerase ribozyme. Science, 2009, 326(5957): 1271–5
Publications
David Shechner
Assistant Professor of Pharmacology
Affiliations
Graduate Programs:
Pharmacology,
Molecular & Cellular Biology (MCB)
Biological Physics, Structure and Design (BPSD)
Molecular Engineering Sciences (MolES)
Other Affiliations:
UW Center of Nuclear Organization and Function (UW-CNOF)
BBI
Institute for Stem Cell and Regenerative Medicine (ISCRM)
Fred Hutch/UW Cancer Consortium
RNA Society